Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824070.1_cds_XP_016501727.1_15432
CDS Infomation

[gene=LOC107820038] [db_xref=GeneID:107820038] [protein=COMPASS-like H3K4 histone methylase component WDR5A] [protein_id=XP_016501727.1] [location=join(73323..73952,74832..75569)] [gbkey=CDS]
Sequence

ATGTCCTTTGAAATAGAGAGAGATCTAGACATAGACATGGCTTCAGCAATGGACTTTGAG
ACTCCTAATTCACCTGCTTCAGCTCCATCTTTCGCCATAAGACCTAACCACAGTTTCTTG
AGAAGTTTTTCTACAAAAGAACCTTCTAATTTCTCTGAAAATCTTCCCTATAGCCCACCT
CGTTTAAGCACTTCAGTTCTCTCTTCCAATACATGCCTCCACAACTCTCAACCTTCAACT
CCACGACTTTCCTTCACGCTCAACAATCCAAAATTAGCCGATGATCATCACTTTCAAACA
ACTTATAGGTGCATTTCATCTGTGTTAAAAAAAGATGGACAGATCTTGTCTGTTGCTACG
TCAAATGGTCTCGTTTATACAGGGTCTCAGGCTAATGTAATACGTGTTTGGAAGTTGCCA
GAGTTCACTGAATGTGATCATCTTAAGACGAGGGGGTCAATGGTTGTTGCATTACAAGTG
TCAAATGATATGGTTTATGCTGCCTATGCGGATTGCAAGATTCGGGTTTGGCGTAGGACT
TGGGAAGGTGTTATCAAGCATGTCCGAGTTGCTACTATTCCTAAGGTTGGAAGCTTTGTC
CGGAGCTATATCTCCGGTAGAGATAAGATGATGAAGCACATGGGGCCAATATCATCACTG
GCAATTAACATATCAGATGACATCCTTTACTCAGCTTCCCTTGATAAAACAGTAAAAGTA
TGGAGAATTTCTGATCTCAAATGCATAGAGACAATCCAAGCCCATAACGATCCGATAAAT
GCCATTGTTGTTGGTGATGATGGTGTCCTCTATACAGCTTCTGATGATGCCACAGTCCGA
GTATGGCGTCGCAATTTTTGTAGTGGAGATAGGCCACATTCCCTTACTGTGACATTACCA
GCTAAATGTTCACCAGTAAAGACATTAGCATTAACAACTGATGGTGGGGTACTTTATGGT
GGGTGCAGTGATGGTTACATTCATTATTGGATAAAAGGTTGGTTTTCGGGGCAATTACAA
TATGGGGGTGCACTTCTTGGACACACACATTCTGTCATGTGCTTGTCCAGTACGGCTAAC
TATTTGGTCAGTGGCTCAGCGGACTCAACGTGCAGGGTCTGGTTTAGGGAGCAAGATTGT
CAACATGTTTGCGTGGCGATTTTGCAAGGTCACAGAGGACCGATTAGGTGCGTTACAGCT
TTCCCTGGACGCGTGAATAATGAGGAGAGTGAAGATGGTTGCACCATTTGCACTGGAAGT
CTTGATGGAGTTATCAAGATGTGGTGTGTGAGATGCACCAGCAGTAGCAGTGATAATAAG
GGCAAAGGCTCTTCACAAAATGCTTGTGATTATTTTGAGATCGCTTAA

Peptide Sequence

PEP ID

XP_016501727.1
PEP Infomation

PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Nicotiana tabacum]
Sequence

MSFEIERDLDIDMASAMDFETPNSPASAPSFAIRPNHSFLRSFSTKEPSNFSENLPYSPP
RLSTSVLSSNTCLHNSQPSTPRLSFTLNNPKLADDHHFQTTYRCISSVLKKDGQILSVAT
SNGLVYTGSQANVIRVWKLPEFTECDHLKTRGSMVVALQVSNDMVYAAYADCKIRVWRRT
WEGVIKHVRVATIPKVGSFVRSYISGRDKMMKHMGPISSLAINISDDILYSASLDKTVKV
WRISDLKCIETIQAHNDPINAIVVGDDGVLYTASDDATVRVWRRNFCSGDRPHSLTVTLP
AKCSPVKTLALTTDGGVLYGGCSDGYIHYWIKGWFSGQLQYGGALLGHTHSVMCLSSTAN
YLVSGSADSTCRVWFREQDCQHVCVAILQGHRGPIRCVTAFPGRVNNEESEDGCTICTGS
LDGVIKMWCVRCTSSSSDNKGKGSSQNACDYFEIA

Transcript Sequence

Gene sequence data has not been registered.